Basic Information
Locus ID:
gene-QOZ80_2AG0109500
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2A | 7993943 | 7996721 | + | gene-QOZ80_2AG0109500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.65 | 19,751.39 Da | 28.77 | 120.87 | 0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 22 | 61 | 5.2E-10 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 113 | 134 | 0.36 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 88 | 108 | 0.17 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 22 | 180 | 6.24E-34 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 21 | 181 | 2.1E-49 | IPR032675 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G10290.1 | leucine-rich repeat transmembrane protein kinase family protein. | 0 |
| RefSeq | XP_002451958.1 | probable LRR receptor-like serine/threonine-protein kinase At5g10290 [Sorghum bicolor] | 0 |
| Q6K4T4 | LRR receptor kinase SERK2 OS=Oryza sativa subsp. japonica OX=39947 GN=SERK4 PE=3 SV=1 | 0 | |
| TrEMBL | A0A811N5B9 | Protein kinase domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS10460 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg31112 |
| Asparagaceae | Asparagus officinalis | 4 | AsparagusV1_03.2897.V1.1, AsparagusV1_04.934.V1.1 ... |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq05G2321 |
| Casuarinaceae | Casuarina glauca | 3 | Cgl05G1692, Cgl05G2457, Cgl05G2491 |
| Poaceae | Echinochloa crus-galli | 1 | BH01.1045 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_2AG0109500 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.1HG0006820.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_066036 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-17336 |