HalophFGD

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Basic Information
Locus ID: gene-QOZ80_2AG0109450
Species & Taxonomic ID: Eleusine coracana subsp. coracana & 191504
Genome Assembly: GCA_032690845.1
Description: Sigma factor PP2C-like phosphatases
Maps and Mapping Data
Chromosome Start End Strand ID
chr2A 7954890 7961398 + gene-QOZ80_2AG0109450
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.00 120,484.98 Da 40.17 88.92 -0.20
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd00038 CAP_ED 612 741 1.25153E-13 IPR000595
CDD cd00038 CAP_ED 486 595 1.30959E-21 IPR000595
CDD cd00143 PP2Cc 120 394 3.78598E-58 IPR001932
Pfam PF00027 Cyclic nucleotide-binding domain 631 734 1.0E-9 IPR000595
Pfam PF00027 Cyclic nucleotide-binding domain 505 596 2.3E-20 IPR000595
Pfam PF00069 Protein kinase domain 792 1026 9.5E-32 IPR000719
Pfam PF00481 Protein phosphatase 2C 124 373 1.1E-36 IPR001932
SUPERFAMILY SSF81606 PP2C-like 88 396 1.96E-54 IPR036457
SUPERFAMILY SSF51206 cAMP-binding domain-like 604 740 7.59E-20 IPR018490
SUPERFAMILY SSF51206 cAMP-binding domain-like 465 596 1.83E-26 IPR018490
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 765 1043 3.32E-45 IPR011009
Gene3D G3DSA:2.60.120.10 Jelly Rolls 599 756 5.9E-23 IPR014710
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 857 1038 1.8E-58 -
Gene3D G3DSA:3.60.40.10 - 99 395 2.3E-65 IPR036457
Gene3D G3DSA:2.60.120.10 Jelly Rolls 452 594 4.2E-31 IPR014710
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1 771 856 1.8E-58 -
SMART SM00100 cnmp_10 612 752 1.1E-6 IPR000595
SMART SM00100 cnmp_10 486 609 4.6E-13 IPR000595
SMART SM00220 serkin_6 784 1026 4.1E-25 IPR000719
SMART SM00332 PP2C_4 105 392 4.6E-59 IPR001932
ProSiteProfiles PS51746 PPM-type phosphatase domain profile. 104 394 40.796471 IPR001932
ProSiteProfiles PS50042 cAMP/cGMP binding motif profile. 486 595 25.792801 IPR000595
ProSiteProfiles PS50042 cAMP/cGMP binding motif profile. 612 736 16.674801 IPR000595
ProSiteProfiles PS50011 Protein kinase domain profile. 772 1026 25.333088 IPR000719
ProSitePatterns PS01032 PPM-type phosphatase domain signature. 140 148 - IPR000222
PRINTS PR00103 cAMP-dependent protein kinase signature 507 521 1.8E-7 -
PRINTS PR00103 cAMP-dependent protein kinase signature 730 742 1.8E-7 -
PRINTS PR00103 cAMP-dependent protein kinase signature 522 536 1.8E-7 -
PRINTS PR00103 cAMP-dependent protein kinase signature 557 566 1.8E-7 -
MobiDBLite mobidb-lite consensus disorder prediction 27 51 - -
MobiDBLite mobidb-lite consensus disorder prediction 27 56 - -
Gene Ontology
Biological Process:
GO:0006468 (protein phosphorylation)
Molecular Function:
GO:0004672 (protein kinase activity) GO:0005524 (ATP binding) GO:0016791 (phosphatase activity) GO:0043169 (cation binding)
KEGG Pathway
KO Term:
K19477 (cGMP-dependent protein kinase 2 [EC:2.7.11.12])
Pathway:
ko04022 (cGMP-PKG signaling pathway) map04022 (cGMP-PKG signaling pathway) map04611 (Platelet activation)
Best hit
Source Best Hit ID Description E-value
TAIR AT2G20050.1 protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases. 0
RefSeq XP_039837390.1 protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein-like [Panicum virgatum] 0
Swiss-Prot Q9SL76 Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein OS=Arabidopsis thaliana OX=3702 GN=At2g20050/At2g20040 PE=2 SV=2 0
TrEMBL A0A5J9VAK2 protein-serine/threonine phosphatase OS=Eragrostis curvula OX=38414 GN=EJB05_24242 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 4 jg11200, jg12489, jg27949, jg31641
Aizoaceae Mesembryanthemum crystallinum 2 gene_10739, gene_4189
Amaranthaceae Atriplex hortensis 3 Ah014594, Ah020583, Ah020588
Amaranthaceae Beta vulgaris 1 BVRB_8g197060
Amaranthaceae Salicornia bigelovii 4 Sbi_jg25033, Sbi_jg38175, Sbi_jg6297, Sbi_jg8881
Amaranthaceae Salicornia europaea 2 Seu_jg15554, Seu_jg19721
Amaranthaceae Suaeda aralocaspica 1 GOSA_00007757
Amaranthaceae Suaeda glauca 2 Sgl42270, Sgl47046
Amaranthaceae Chenopodium album 6 gene:ENSEOMG00000011728, gene:ENSEOMG00000013583 ...
gene:ENSEOMG00000029309, gene:ENSEOMG00000034013, gene:ENSEOMG00000044348, gene:ENSEOMG00000044982
Amaranthaceae Chenopodium quinoa 3 CQ.Regalona.r1.3AG0015740, CQ.Regalona.r1.3BG0016790 ...
CQ.Regalona.r1.8BG0022670
Anacardiaceae Pistacia vera 2 pistato.v30238060, pistato.v30256950
Apiaceae Apium graveolens 3 Ag1G01922, Ag5G01580, Ag9G01808
Arecaceae Cocos nucifera 5 COCNU_01G017210, COCNU_03G011750, scaffold006566G000010 ...
scaffold006566G000040, scaffold006566G000060
Arecaceae Phoenix dactylifera 4 gene-LOC103696015, gene-LOC103702537, gene-LOC103710933 ...
gene-LOC120103717
Asparagaceae Asparagus officinalis 3 AsparagusV1_01.1954.V1.1, AsparagusV1_05.1050.V1.1 ...
AsparagusV1_07.914.V1.1
Asteraceae Flaveria trinervia 3 Ftri15G12986, Ftri15G27950, Ftri16G23273
Brassicaceae Arabidopsis thaliana 2 AT2G20050.1, AT3G06270.1
Brassicaceae Eutrema salsugineum 2 Thhalv10001889m.g.v1.0, Thhalv10021055m.g.v1.0
Brassicaceae Schrenkiella parvula 2 Sp3g05190.v2.2, Sp3g33360.v2.2
Brassicaceae Brassica nigra 4 BniB02g072800.2N, BniB03g024680.2N, BniB03g069610.2N ...
BniB07g059750.2N
Casuarinaceae Casuarina equisetifolia 3 Ceq06G1534, Ceq09G1262, Ceq09G1263
Casuarinaceae Casuarina glauca 3 Cgl06G1588, Cgl09G1350, Cgl09G1351
Cymodoceaceae Cymodocea nodosa 2 gene.Cymno05g05290, gene.Cymno16g02870
Dunaliellaceae Dunaliella salina 4 Dusal.0198s00006.v1.0, Dusal.0198s00007.v1.0 ...
Dusal.0261s00015.v1.0, Dusal.0311s00004.v1.0
Hydrocharitaceae Thalassia testudinum 3 gene.Thate03g16300, gene.Thate06g15990, gene.Thate06g22690
Malvaceae Hibiscus hamabo Siebold & Zucc. 1 nbisL1-mrna-7053
Nitrariaceae Nitraria sibirica 2 evm.TU.LG07.1125, evm.TU.LG11.1409
Plantaginaceae Plantago ovata 2 Pov_00003901, Pov_00026243
Plumbaginaceae Limonium bicolor 3 Lb0G38087, Lb1G00112, Lb7G34075
Poaceae Echinochloa crus-galli 6 AH03.3899, AH07.1238, BH03.4187, BH07.1331, CH07.1040 ...
CH07.308
Poaceae Eleusine coracana subsp. coracana 4 gene-QOZ80_2AG0109450, gene-QOZ80_2BG0163000 ...
gene-QOZ80_7AG0579680, gene-QOZ80_7BG0610830
Poaceae Hordeum vulgare 2 HORVU.MOREX.r3.2HG0119030.1, HORVU.MOREX.r3.6HG0580660.1
Poaceae Lolium multiflorum 2 gene-QYE76_029561, gene-QYE76_039209
Poaceae Oryza coarctata 4 Oco03G007740, Oco04G008100, Oco13G014290, Oco14G015130
Poaceae Oryza sativa 2 LOC_Os02g17970.1, LOC_Os07g45170.1
Poaceae Paspalum vaginatum 2 gene-BS78_02G374800, gene-BS78_04G121100
Poaceae Puccinellia tenuiflora 2 Pt_Chr0201921, Pt_Chr0506174
Poaceae Sporobolus alterniflorus 3 Chr09G000460, Chr19G001180, Chr27G016230
Poaceae Thinopyrum elongatum 3 Tel2E01G286000, Tel3E01G467900, Tel6E01G378600
Poaceae Triticum dicoccoides 5 gene_TRIDC2AG017600, gene_TRIDC2BG021250 ...
gene_TRIDC5AG072250, gene_TRIDC6AG027740, gene_TRIDC6BG035380
Poaceae Triticum aestivum 6 TraesCS2A02G141100.2, TraesCS2B02G166100.3 ...
TraesCS2D02G144500.3, TraesCS6A02G191000.1, TraesCS6B02G231400.1, TraesCS6D02G174700.1
Poaceae Zea mays 3 Zm00001eb110450_P001, Zm00001eb203570_P004 ...
Zm00001eb329360_P001
Poaceae Zoysia japonica 1 nbis-gene-34103
Poaceae Zoysia macrostachya 2 Zma_g15333, Zma_g6975
Portulacaceae Portulaca oleracea 5 evm.TU.LG02.2866, evm.TU.LG03.1911, evm.TU.LG14.212 ...
evm.TU.LG18.982, evm.TU.LG23.1067
Posidoniaceae Posidonia oceanica 4 gene.Posoc01g11120, gene.Posoc01g11140, gene.Posoc05g07970 ...
gene.Posoc09g07280
Rhizophoraceae Bruguiera sexangula 3 evm.TU.Scaffold_3_RagTag.509, evm.TU.Scaffold_4_RagTag.1922 ...
evm.TU.Scaffold_6_RagTag.668
Rhizophoraceae Carallia pectinifolia 4 nbisL1-mrna-1453, nbisL1-mrna-16014, nbisL1-mrna-25654 ...
nbisL1-mrna-25658
Rhizophoraceae Ceriops tagal 3 nbisL1-mrna-10370, nbisL1-mrna-14767, nbisL1-mrna-4118
Rhizophoraceae Ceriops zippeliana 3 nbisL1-mrna-4691, nbisL1-mrna-560, nbisL1-mrna-6232
Rhizophoraceae Kandelia candel 3 evm.TU.utg000008l.1093, evm.TU.utg000011l.404 ...
evm.TU.utg000019l.911
Rhizophoraceae Kandelia obovata 3 Maker00000656, Maker00008137, Maker00012698
Rhizophoraceae Rhizophora apiculata 2 nbisL1-mrna-14789, nbisL1-mrna-15370
Rhizophoraceae Rhizophora mangle 3 nbisL1-mrna-1205, nbisL1-mrna-2063, nbisL1-mrna-3408
Salicaceae Populus euphratica 4 populus_peu07830, populus_peu21959, populus_peu22023 ...
populus_peu37646
Solanaceae Lycium barbarum 2 gene-LOC132641084, gene-LOC132645030
Solanaceae Solanum chilense 2 SOLCI003483600, SOLCI005629700
Solanaceae Solanum pennellii 2 gene-LOC107008357, gene-LOC107020369
Tamaricaceae Reaumuria soongarica 2 gene_13276, gene_8916
Tamaricaceae Tamarix chinensis 2 TC02G0102, TC10G1458
Zosteraceae Zostera marina 2 Zosma01g20530.v3.1, Zosma05g13440.v3.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.