HalophFGD

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Basic Information
Locus ID: gene-QOZ80_2AG0108830
Species & Taxonomic ID: Eleusine coracana subsp. coracana & 191504
Genome Assembly: GCA_032690845.1
Description: Protein of unknown function (DUF295)
Maps and Mapping Data
Chromosome Start End Strand ID
chr2A 7245749 7247385 - gene-QOZ80_2AG0108830
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
7.92 49,471.54 Da 47.43 84.21 -0.17
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF03478 Protein of unknown function (DUF295) 368 426 4.7E-15 IPR005174
SUPERFAMILY SSF101898 NHL repeat 161 296 2.12E-6 -
SUPERFAMILY SSF81383 F-box domain 65 106 1.31E-6 IPR036047
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_025799050.1 uncharacterized protein LOC112878972 [Panicum hallii] 0
TrEMBL A0A5J9TN55 DUF295 domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_46474 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Asparagaceae Asparagus officinalis 2 AsparagusV1_01.113.V1.1, AsparagusV1_07.512.V1.1
Poaceae Echinochloa crus-galli 3 AH07.1172, BH07.1248, CH08.2609
Poaceae Eleusine coracana subsp. coracana 7 gene-QOZ80_2AG0108680, gene-QOZ80_2AG0108760 ...
gene-QOZ80_2AG0108780, gene-QOZ80_2AG0108810, gene-QOZ80_2AG0108820, gene-QOZ80_2AG0108830, gene-QOZ80_3BG0271520
Poaceae Hordeum vulgare 1 HORVU.MOREX.r3.7HG0653210.1.CDS1
Poaceae Paspalum vaginatum 1 gene-BS78_04G116200
Poaceae Sporobolus alterniflorus 7 Chr06G030960, Chr09G000120, Chr09G000130, Chr09G000140 ...
Chr09G000150, Chr15G022420, Chr20G002600
Poaceae Triticum aestivum 9 TraesCS6A02G048400.1.cds1, TraesCS6B02G065000.1 ...
TraesCS7A02G112100.1, TraesCS7A02G112600.1.cds1, TraesCS7B02G009700.1, TraesCS7B02G011800.1, TraesCS7D02G106800.1, TraesCS7D02G107800.1.cds1, TraesCSU02G107400.1.cds1
Poaceae Zea mays 1 Zm00001eb237580_P001
Poaceae Zoysia japonica 4 nbis-gene-34140, nbis-gene-50953, nbis-gene-50955 ...
nbis-gene-58327
Poaceae Zoysia macrostachya 2 Zma_g12567, Zma_g15362
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.