Basic Information
Locus ID:
gene-QOZ80_2AG0108760
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Protein of unknown function (DUF295)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2A | 7204153 | 7205430 | - | gene-QOZ80_2AG0108760 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.90 | 45,595.21 Da | 39.58 | 89.98 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 44 | 81 | 7.6E-5 | IPR001810 |
| Pfam | PF03478 | Protein of unknown function (DUF295) | 341 | 396 | 5.5E-11 | IPR005174 |
| SUPERFAMILY | SSF50969 | YVTN repeat-like/Quinoprotein amine dehydrogenase | 89 | 395 | 5.57E-9 | IPR011044 |
| SUPERFAMILY | SSF81383 | F-box domain | 44 | 98 | 1.03E-8 | IPR036047 |
| SMART | SM00256 | fbox_2 | 48 | 87 | 0.0043 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_025799050.1 | uncharacterized protein LOC112878972 [Panicum hallii] | 0 |
| TrEMBL | A0A8T0WWN9 | DUF295 domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_1NG192500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_01.113.V1.1, AsparagusV1_07.512.V1.1 |
| Poaceae | Echinochloa crus-galli | 3 | AH07.1172, BH07.1248, CH08.2609 |
| Poaceae | Eleusine coracana subsp. coracana | 7 | gene-QOZ80_2AG0108680, gene-QOZ80_2AG0108760 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.7HG0653210.1.CDS1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_04G116200 |
| Poaceae | Sporobolus alterniflorus | 7 | Chr06G030960, Chr09G000120, Chr09G000130, Chr09G000140 ... |
| Poaceae | Triticum aestivum | 9 | TraesCS6A02G048400.1.cds1, TraesCS6B02G065000.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb237580_P001 |
| Poaceae | Zoysia japonica | 4 | nbis-gene-34140, nbis-gene-50953, nbis-gene-50955 ... |
| Poaceae | Zoysia macrostachya | 2 | Zma_g12567, Zma_g15362 |