Basic Information
Locus ID:
gene-QOZ80_2AG0105330
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Short Name:
EBF1
Description:
Leucine-rich repeat - CC (cysteine-containing) subfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2A | 4575207 | 4577282 | - | gene-QOZ80_2AG0105330 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.10 | 68,471.76 Da | 45.30 | 105.26 | 0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 63 | 103 | 5.2E-4 | IPR001810 |
| Pfam | PF13516 | Leucine Rich repeat | 221 | 244 | 0.0081 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 379 | 401 | 0.86 | IPR001611 |
| SUPERFAMILY | SSF81383 | F-box domain | 59 | 99 | 1.57E-6 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 169 | 324 | 4.51E-21 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 346 | 608 | 7.06E-40 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 538 | 648 | 3.7E-17 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 453 | 537 | 2.4E-13 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 312 | 452 | 1.9E-18 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 57 | 297 | 1.5E-32 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 405 | 430 | 540.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 353 | 378 | 27.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 565 | 589 | 3.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 539 | 564 | 0.0011 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 379 | 404 | 0.0039 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 459 | 484 | 36.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 166 | 194 | 470.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 221 | 246 | 1.3E-7 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 247 | 272 | 0.02 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 591 | 616 | 520.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 485 | 510 | 0.094 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 512 | 537 | 2.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 273 | 298 | 0.26 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 195 | 220 | 20.0 | IPR006553 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 0 |
| RefSeq | XP_025798413.1 | EIN3-binding F-box protein 2-like [Panicum hallii] | 0 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9VDN1 | F-box domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_24727 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology