Basic Information
Locus ID:
gene-QOZ80_2AG0104910
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2A | 4300616 | 4306371 | + | gene-QOZ80_2AG0104910 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.92 | 69,949.30 Da | 48.83 | 92.81 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 144 | 202 | 2.7E-11 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 97 | 112 | 0.7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 399 | 579 | 3.4E-17 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 308 | 584 | 5.68E-47 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 64 | 246 | 3.3E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 143 | 280 | 1.0E-22 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 142 | 7.6E-20 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 313 | 390 | 6.8E-7 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 391 | 605 | 1.0E-42 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 333 | 589 | 20.6406 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 144 | 165 | 7.488635 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 339 | 361 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22130.1 | STRUBBELIG-receptor family 8. | 0 |
| RefSeq | XP_021313914.1 | protein STRUBBELIG-RECEPTOR FAMILY 8 [Sorghum bicolor] | 0 |
| Q6R2J8 | Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana OX=3702 GN=SRF8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2T7F348 | Protein kinase domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_1G069900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology