Basic Information
Locus ID:
gene-QOZ80_2AG0103600
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
RING-like zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2A | 3315224 | 3315802 | - | gene-QOZ80_2AG0103600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.58 | 19,867.91 Da | 74.71 | 91.35 | 0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 142 | 184 | 1.1E-10 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 141 | 188 | 3.32E-17 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 104 | 189 | 6.4E-17 | IPR013083 |
| SMART | SM00184 | ring_2 | 142 | 183 | 3.9E-6 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 142 | 184 | 11.869652 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 38 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G35480.1 | RING-H2 finger A3B. Encodes a putative RING-H2 finger protein RHA3b. | 0 |
| RefSeq | XP_004951705.1 | RING-H2 finger protein ATL56 [Setaria italica] | 0 |
| Q9ZT49 | Probable E3 ubiquitin-protein ligase ATL45 OS=Arabidopsis thaliana OX=3702 GN=ATL45 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9STY2 | RING-type domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_52109 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology