Basic Information
Locus ID:
gene-QOZ80_1BG0098360
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
PWWP domain
Maps and Mapping Data
| Chromosome/Scaffold | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1B | 72489091 | 72491796 | - | gene-QOZ80_1BG0098360 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.45 | 98,069.52 Da | 52.03 | 60.00 | -0.86 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05162 | PWWP | 89 | 175 | 6.72321E-32 | - |
| Pfam | PF00855 | PWWP domain | 89 | 160 | 8.9E-13 | IPR000313 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 86 | 191 | 7.22E-24 | - |
| SUPERFAMILY | SSF54928 | RNA-binding domain, RBD | 808 | 859 | 4.62E-5 | IPR035979 |
| Gene3D | G3DSA:2.30.30.140 | - | 78 | 182 | 2.7E-20 | - |
| SMART | SM00293 | PWWP_4 | 89 | 150 | 7.3E-7 | IPR000313 |
| ProSiteProfiles | PS50812 | PWWP domain profile. | 91 | 152 | 12.967793 | IPR000313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 660 | 704 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 759 | 774 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 677 | 691 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 721 | 787 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 392 | 407 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 329 | 344 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 743 | 758 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 542 | 556 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 425 | 454 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 288 | 318 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 595 | 614 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 288 | 614 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 366 | 391 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 39 | 53 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 75 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 564 | 587 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 881 | 901 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 455 | 478 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 519 | 541 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G09670.1 | Tudor/PWWP/MBT superfamily protein. | 0 |
| RefSeq | XP_021312812.1 | uncharacterized protein LOC110433943 [Sorghum bicolor] | 0 |
| Q9SF36 | PWWP domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=PDP2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1E5WHH4 | PWWP domain-containing protein OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0002138 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology