Basic Information
Locus ID:
gene-QOZ80_1BG0098110
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1B | 72359636 | 72362103 | + | gene-QOZ80_1BG0098110 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.61 | 51,985.09 Da | 48.51 | 71.95 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 192 | 451 | 3.06708E-41 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 415 | 451 | 1.1E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 285 | 321 | 8.8E-6 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 326 | 366 | 2.7E-4 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 153 | 452 | 1.33E-59 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 117 | 453 | 8.2E-123 | IPR015943 |
| SMART | SM00320 | WD40_4 | 412 | 451 | 1.0E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 241 | 278 | 7.9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 198 | 238 | 0.059 | IPR001680 |
| SMART | SM00320 | WD40_4 | 282 | 321 | 5.7E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 369 | 409 | 290.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 324 | 366 | 2.0E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 154 | 195 | 100.0 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 289 | 330 | 14.084198 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 419 | 452 | 14.151034 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 289 | 321 | 11.075592 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 419 | 452 | 11.708317 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 331 | 375 | 8.804123 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 438 | 452 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 61 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 129 | 157 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G13840.1 | FIZZY-related 3. | 0 |
| RefSeq | XP_004971426.1 | protein FIZZY-RELATED 3 [Setaria italica] | 0 |
| Q8LPL5 | Protein FIZZY-RELATED 3 OS=Arabidopsis thaliana OX=3702 GN=FZR3 PE=1 SV=1 | 0 | |
| TrEMBL | K3XHB8 | WD_REPEATS_REGION domain-containing protein OS=Setaria italica OX=4555 GN=101766533 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology