Basic Information
Locus ID:
gene-QOZ80_1BG0094470
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Small ubiquitin-related modifier
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1B | 70321618 | 70323372 | - | gene-QOZ80_1BG0094470 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.93 | 11,001.27 Da | 48.49 | 70.00 | -0.64 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16116 | Ubl_Smt3_like | 17 | 89 | 6.19207E-49 | - |
| Pfam | PF11976 | Ubiquitin-2 like Rad60 SUMO-like | 18 | 88 | 2.8E-25 | IPR022617 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 3 | 93 | 4.58E-28 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 2 | 93 | 2.2E-39 | - |
| SMART | SM00213 | ubq_7 | 18 | 89 | 4.5E-14 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 16 | 93 | 16.385197 | IPR000626 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G26840.1 | small ubiquitin-like modifier 1. Encodes a small ubiquitin-like modifier (SUMO) polypeptide that becomes covalently attached to various intracellular protein targets, much like ubiquitination, leading to post-translational modification of those targets. | 0 |
| RefSeq | XP_025816958.1 | small ubiquitin-related modifier 1 [Panicum hallii] | 0 |
| P55857 | Small ubiquitin-related modifier 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SUMO1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3L6SKZ8 | Small ubiquitin-related modifier OS=Panicum miliaceum OX=4540 GN=C2845_PM07G32700 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology