Basic Information
Locus ID:
gene-QOZ80_1BG0094450
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1B | 70312803 | 70313675 | - | gene-QOZ80_1BG0094450 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.82 | 31,922.32 Da | 72.87 | 48.93 | -0.94 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16449 | RING-HC | 242 | 279 | 1.858E-9 | - |
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 241 | 285 | 8.9E-10 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 241 | 286 | 7.3E-14 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 224 | 290 | 6.6E-12 | IPR013083 |
| SMART | SM00184 | ring_2 | 242 | 279 | 7.4E-5 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 242 | 280 | 10.881201 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 205 | 233 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 122 | 153 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 154 | 168 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 29 | 49 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 119 | 191 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 80 | 107 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 83 | 107 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 169 | 188 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 68 | - | - |
| Coils | Coil | Coil | 167 | 187 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25030.3 | - | 0 |
| RefSeq | XP_008656941.1 | uncharacterized protein LOC103636359 [Zea mays] | 0 |
| TrEMBL | A0A0E0JST8 | RING-type domain-containing protein OS=Oryza punctata OX=4537 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology