Basic Information
Locus ID:
gene-QOZ80_1BG0087890
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1B | 66481193 | 66489256 | - | gene-QOZ80_1BG0087890 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.18 | 115,034.75 Da | 38.03 | 90.84 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 621 | 887 | 6.08011E-90 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 617 | 884 | 3.7E-47 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 70 | 4.2E-8 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 150 | 210 | 1.6E-6 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 602 | 897 | 3.14E-76 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 45 | 384 | 6.46E-51 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 289 | 403 | 2.6E-13 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 590 | 690 | 3.9E-33 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 191 | 288 | 3.6E-19 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 190 | 6.1E-42 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 691 | 904 | 1.0E-56 | - |
| SMART | SM00220 | serkin_6 | 615 | 887 | 8.1E-37 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 615 | 888 | 37.558998 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 735 | 747 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 621 | 643 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 895 | 915 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 892 | 915 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G06840.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_025815113.1 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X1 [Panicum hallii] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2S3HQJ1 | Protein kinase domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_5G112700 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology