Basic Information
Locus ID:
gene-QOZ80_1BG0086270
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
F-box-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1B | 65529197 | 65529993 | - | gene-QOZ80_1BG0086270 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.65 | 26,517.07 Da | 55.09 | 87.31 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 32 | 78 | 6.4E-10 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 119 | 214 | 1.15E-6 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 32 | 79 | 7.06E-9 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 114 | 224 | 4.8E-7 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 25 | 77 | 4.6E-10 | - |
| ProSiteProfiles | PS50181 | F-box domain profile. | 28 | 76 | 9.232525 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039851792.1 | uncharacterized protein LOC120710205 [Panicum virgatum] | 0 |
| TrEMBL | A0A8T0SVI6 | F-box domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_5KG575700 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 10 | AH02.3531, AH08.564, BH02.3424, BH08.2212, BH08.597 ... |
| Poaceae | Eleusine coracana subsp. coracana | 15 | gene-QOZ80_1AG0007090, gene-QOZ80_1BG0050140 ... |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.3HG0319820.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 11 | gene-QYE76_009231, gene-QYE76_009232, gene-QYE76_009233 ... |
| Poaceae | Puccinellia tenuiflora | 6 | Pt_Chr0205788, Pt_Chr0205789, Pt_Chr0207610, Pt_Chr0207611 ... |
| Poaceae | Sporobolus alterniflorus | 2 | Chr20G001670, Chr20G010470 |
| Poaceae | Thinopyrum elongatum | 5 | Tel3E01G785300, Tel6E01G283500, Tel7E01G327200 ... |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC6AG018010 |
| Poaceae | Triticum aestivum | 5 | TraesCS3B02G537900.1, TraesCS3B02G538000.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb386420_P001 |
| Poaceae | Zoysia japonica | 4 | nbis-gene-31300, nbis-gene-38896, nbis-gene-48553 ... |
| Poaceae | Zoysia macrostachya | 2 | Zma_g11315, Zma_g15927 |