Basic Information
Locus ID:
gene-QOZ80_1BG0085790
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Mitochondrial protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1B | 65240716 | 65248968 | + | gene-QOZ80_1BG0085790 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.09 | 73,994.21 Da | 39.54 | 84.95 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 367 | 597 | 2.35797E-57 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 446 | 481 | 4.6E-7 | IPR001680 |
| Pfam | PF00069 | Protein kinase domain | 15 | 272 | 1.6E-44 | IPR000719 |
| Pfam | PF00400 | WD domain, G-beta repeat | 403 | 439 | 0.04 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 487 | 523 | 4.4E-9 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 527 | 565 | 1.7E-8 | IPR001680 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 11 | 287 | 4.45E-63 | IPR011009 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 359 | 597 | 5.19E-64 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 341 | 545 | 2.9E-55 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 546 | 617 | 8.1E-11 | IPR015943 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 8 | 298 | 1.8E-66 | - |
| SMART | SM00320 | WD40_4 | 442 | 481 | 1.3E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 400 | 439 | 0.0012 | IPR001680 |
| SMART | SM00320 | WD40_4 | 568 | 606 | 82.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 357 | 397 | 0.0088 | IPR001680 |
| SMART | SM00220 | serkin_6 | 6 | 278 | 2.7E-27 | IPR000719 |
| SMART | SM00320 | WD40_4 | 484 | 523 | 4.5E-10 | IPR001680 |
| SMART | SM00320 | WD40_4 | 526 | 565 | 1.6E-10 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 364 | 406 | 9.672996 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 491 | 532 | 16.45689 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 533 | 568 | 12.657402 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 407 | 448 | 13.315579 | IPR001680 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 278 | 32.315285 | IPR000719 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 491 | 528 | 12.710129 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 407 | 441 | 10.100143 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 533 | 574 | 15.922199 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 449 | 483 | 11.787407 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 449 | 490 | 14.953072 | IPR001680 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 128 | 140 | - | IPR008271 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 510 | 524 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 426 | 440 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 552 | 566 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 468 | 482 | 1.9E-8 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 552 | 566 | 1.9E-8 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 510 | 524 | 1.9E-8 | IPR020472 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G70740.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_039840064.1 | protein DA1-related 1-like isoform X2 [Panicum virgatum] | 0 |
| Q9CAC3 | Cysteine-rich receptor-like protein kinase 43 OS=Arabidopsis thaliana OX=3702 GN=CRK43 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8T0TKD5 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_4KG206915 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_1AG0035780, gene-QOZ80_1BG0085790 |