Basic Information
Locus ID:
gene-QOZ80_1BG0085430
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Jacalin-like lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1B | 64724820 | 64727794 | - | gene-QOZ80_1BG0085430 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.62 | 62,936.80 Da | 35.05 | 70.77 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 444 | 570 | 1.37742E-40 | IPR033734 |
| CDD | cd09612 | Jacalin | 254 | 383 | 6.01783E-37 | IPR033734 |
| CDD | cd09612 | Jacalin | 23 | 151 | 2.18566E-42 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 254 | 383 | 4.8E-26 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 23 | 151 | 2.8E-30 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 441 | 570 | 1.5E-27 | IPR001229 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 12 | 151 | 1.02E-41 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 239 | 383 | 1.22E-38 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 428 | 570 | 1.83E-39 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 424 | 570 | 6.1E-49 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 3 | 152 | 2.3E-53 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 233 | 383 | 5.5E-45 | IPR036404 |
| SMART | SM00915 | Jacalin_2 | 254 | 385 | 5.9E-38 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 441 | 571 | 6.2E-36 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 23 | 153 | 1.8E-40 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 430 | 571 | 48.9855 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 12 | 153 | 48.197647 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 243 | 385 | 46.387463 | IPR001229 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G19715.1 | Mannose-binding lectin superfamily protein. | 0 |
| RefSeq | XP_025819306.1 | jacalin-related lectin 3 [Panicum hallii] | 0 |
| F4HQX1 | Jacalin-related lectin 3 OS=Arabidopsis thaliana OX=3702 GN=JAL3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9VHD9 | Jacalin-type lectin domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_16773 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology