Basic Information
Locus ID:
gene-QOZ80_1BG0084670
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Zinc finger A20 and AN1 domain-containing stress-associated protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1B | 64116334 | 64116900 | - | gene-QOZ80_1BG0084670 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.47 | 21,183.00 Da | 62.82 | 50.90 | -0.64 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01754 | A20-like zinc finger | 30 | 52 | 3.2E-6 | IPR002653 |
| SUPERFAMILY | SSF118310 | AN1-like Zinc finger | 115 | 182 | 1.83E-20 | IPR035896 |
| SUPERFAMILY | SSF57716 | Glucocorticoid receptor-like (DNA-binding domain) | 32 | 65 | 3.99E-8 | - |
| Gene3D | G3DSA:1.20.5.4770 | - | 15 | 73 | 1.3E-12 | - |
| Gene3D | G3DSA:4.10.1110.10 | - | 101 | 183 | 2.3E-18 | IPR035896 |
| SMART | SM00154 | AN1_Zf_4 | 127 | 165 | 2.5E-4 | IPR000058 |
| SMART | SM00259 | A20_3 | 29 | 53 | 5.7E-4 | IPR002653 |
| ProSiteProfiles | PS51036 | Zinc finger A20-type profile. | 26 | 60 | 8.936946 | IPR002653 |
| ProSiteProfiles | PS51039 | Zinc finger AN1-type profile. | 124 | 168 | 10.388178 | IPR000058 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 26 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_031496479.1 | zinc finger A20 and AN1 domain-containing stress-associated protein 4 [Nymphaea colorata] | 0 |
| Q6H754 | Zinc finger A20 and AN1 domain-containing stress-associated protein 5 OS=Oryza sativa subsp. japonica OX=39947 GN=SAP5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A835E3E2 | Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Digitaria exilis OX=1010633 GN=HU200_053429 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 8 | gene-QOZ80_1AG0034460, gene-QOZ80_1AG0034540 ... |
| Poaceae | Sporobolus alterniflorus | 2 | Chr05G024780, Chr05G024860 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-11828 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g8729 |