Basic Information
Locus ID:
gene-QOZ80_1BG0082870
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1B | 62851944 | 62855100 | + | gene-QOZ80_1BG0082870 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.78 | 108,571.30 Da | 36.00 | 93.10 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 40 | 81 | 2.4E-6 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 280 | 339 | 2.0E-9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 476 | 528 | 3.4E-7 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 562 | 577 | 1.8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 85 | 143 | 2.6E-9 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 183 | 206 | 1.8 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 691 | 964 | 9.7E-40 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 682 | 967 | 7.42E-69 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 280 | 483 | 1.26E-34 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 88 | 586 | 3.53E-68 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 773 | 992 | 1.6E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 40 | 196 | 4.0E-41 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 663 | 772 | 2.1E-16 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 275 | 351 | 6.5E-21 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 197 | 274 | 2.1E-15 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 352 | 617 | 3.3E-62 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 491 | 514 | 39.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 230 | 254 | 44.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 107 | 131 | 11.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 539 | 563 | 52.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 181 | 206 | 46.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 132 | 155 | 300.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 689 | 968 | 3.3E-31 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 326 | 350 | 3.3 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 515 | 538 | 310.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 689 | 978 | 35.877052 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 819 | 831 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 695 | 722 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 494 | 507 | 9.0E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 539 | 552 | 9.0E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_025814243.1 | receptor-like protein kinase HSL1 [Panicum hallii] | 0 |
| G7JIK2 | Leucine-rich repeat receptor-like kinase protein SUNN OS=Medicago truncatula OX=3880 GN=SUNN PE=1 SV=2 | 0 | |
| TrEMBL | A0A2T8IKA2 | Protein kinase domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_5G164200 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology