Basic Information
Locus ID:
gene-QOZ80_1BG0080450
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Jacalin-like lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1B | 60326388 | 60327331 | - | gene-QOZ80_1BG0080450 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.87 | 25,938.62 Da | 41.07 | 53.00 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 29 | 163 | 4.53803E-41 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 29 | 163 | 1.8E-27 | IPR001229 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 14 | 163 | 1.57E-40 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 6 | 163 | 1.1E-49 | IPR036404 |
| SMART | SM00915 | Jacalin_2 | 29 | 164 | 3.5E-35 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 18 | 164 | 47.025249 | IPR001229 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G73040.1 | Mannose-binding lectin superfamily protein. | 0 |
| RefSeq | XP_004969699.1 | jacalin-related lectin 19 isoform X1 [Setaria italica] | 0 |
| Q9SSM3 | Jacalin-related lectin 19 OS=Arabidopsis thaliana OX=3702 GN=JAL19 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9SWJ0 | Jacalin-type lectin domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_51180 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology