Basic Information
Locus ID:
gene-QOZ80_1BG0078670
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Short Name:
UBC25
Description:
Belongs to the ubiquitin-conjugating enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1B | 58963041 | 58966905 | + | gene-QOZ80_1BG0078670 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.86 | 47,005.46 Da | 33.30 | 72.87 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00195 | UBCc | 169 | 296 | 2.27753E-40 | IPR000608 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 171 | 318 | 3.5E-27 | IPR000608 |
| SUPERFAMILY | SSF54495 | UBC-like | 158 | 336 | 1.44E-44 | IPR016135 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 142 | 404 | 8.3E-86 | IPR016135 |
| SMART | SM00212 | ubc_7 | 170 | 327 | 1.7E-25 | - |
| ProSiteProfiles | PS50127 | Ubiquitin-conjugating (UBC) core domain profile. | 167 | 327 | 38.843761 | IPR000608 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 71 | 104 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53025.1 | Ubiquitin-conjugating enzyme family protein. | 0 |
| RefSeq | XP_015610951.1 | putative ubiquitin-conjugating enzyme E2 38 [Oryza sativa Japonica Group] | 0 |
| Q8GY87 | Probable ubiquitin-conjugating enzyme E2 26 OS=Arabidopsis thaliana OX=3702 GN=UBC26 PE=2 SV=2 | 0 | |
| TrEMBL | A0A1B6Q5C3 | UBC core domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3003G255700 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology