Basic Information
Locus ID:
gene-QOZ80_1BG0075170
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
proton export across plasma membrane
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1B | 55128600 | 55129898 | - | gene-QOZ80_1BG0075170 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.21 | 48,292.20 Da | 45.35 | 70.23 | -0.80 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF101936 | DNA-binding pseudobarrel domain | 182 | 276 | 3.3E-5 | IPR015300 |
| Gene3D | G3DSA:2.40.330.10 | - | 179 | 277 | 2.3E-7 | IPR015300 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 345 | 382 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 61 | 115 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 140 | 160 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_025875821.1 | uncharacterized protein LOC112936220 [Oryza sativa Japonica Group] | 0 |
| TrEMBL | A0A5J9VKI1 | TF-B3 domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_17853 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 10 | AH02.2296, AH02.3133, AH05.560, AH05.561, BH02.2404, BH05.3 ... |
| Poaceae | Eleusine coracana subsp. coracana | 7 | gene-QOZ80_1AG0021040, gene-QOZ80_1AG0024550 ... |
| Poaceae | Hordeum vulgare | 3 | HORVU.MOREX.r3.3HG0219140.1.CDS1 ... |
| Poaceae | Oryza coarctata | 4 | Oco03G008100, Oco09G004980, Oco10G005030, Oco16G005390 |
| Poaceae | Oryza sativa | 2 | LOC_Os05g14770.1, LOC_Os08g18060.1 |
| Poaceae | Paspalum vaginatum | 5 | gene-BS78_02G015600, gene-BS78_02G016500 ... |
| Poaceae | Sporobolus alterniflorus | 8 | Chr02G015480, Chr03G009010, Chr05G018390, Chr05G023330 ... |
| Poaceae | Thinopyrum elongatum | 2 | Tel3E01G028700, Tel7E01G746400 |
| Poaceae | Triticum aestivum | 17 | TraesCS2A02G265200.1.cds1, TraesCS2D02G258300.1.cds1 ... |
| Poaceae | Zea mays | 2 | Zm00001eb037340_P001, Zm00001eb153680_P001 |
| Poaceae | Zoysia japonica | 4 | nbis-gene-17899, nbis-gene-17900, nbis-gene-17906 ... |
| Poaceae | Zoysia macrostachya | 2 | Zma_g10450, Zma_g27902 |