Basic Information
Locus ID:
gene-QOZ80_1BG0073940
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
phosphatase 2A 55 kDa regulatory subunit B'
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1B | 52804070 | 52810153 | + | gene-QOZ80_1BG0073940 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.39 | 56,469.55 Da | 51.09 | 73.98 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 220 | 256 | 0.15 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 53 | 501 | 7.33E-37 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 82 | 506 | 8.5E-29 | IPR015943 |
| SMART | SM00320 | WD40_4 | 267 | 307 | 18.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 118 | 158 | 18.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 45 | 80 | 4.6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 217 | 256 | 0.79 | IPR001680 |
| SMART | SM00320 | WD40_4 | 314 | 364 | 97.0 | IPR001680 |
| PIRSF | PIRSF037309 | PPA2_B55 | 26 | 508 | 2.1E-201 | IPR000009 |
| ProSitePatterns | PS01024 | Protein phosphatase 2A regulatory subunit PR55 signature 1. | 118 | 132 | - | IPR018067 |
| ProSitePatterns | PS01025 | Protein phosphatase 2A regulatory subunit PR55 signature 2. | 226 | 240 | - | IPR018067 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 228 | 255 | 1.1E-155 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 341 | 368 | 1.1E-155 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 134 | 162 | 1.1E-155 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 105 | 133 | 1.1E-155 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 256 | 283 | 1.1E-155 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 59 | 79 | 1.1E-155 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 477 | 506 | 1.1E-155 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 369 | 394 | 1.1E-155 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 284 | 312 | 1.1E-155 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 395 | 421 | 1.1E-155 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 313 | 340 | 1.1E-155 | IPR000009 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
Gene Ontology
Molecular Function:
Cellular Component:
KEGG Pathway
Pathway:
ko03015 (mRNA surveillance pathway)
map03015 (mRNA surveillance pathway)
ko04071 (Sphingolipid signaling pathway)
map04071 (Sphingolipid signaling pathway)
ko04111 (Cell cycle - yeast)
map04111 (Cell cycle - yeast)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
ko04390 (Hippo signaling pathway)
map04390 (Hippo signaling pathway)
ko04391 (Hippo signaling pathway - fly)
map04391 (Hippo signaling pathway - fly)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G17720.2 | Protein phosphatase 2A, regulatory subunit PR55. type 2A protein serine/threonine phosphatase 55 kDa B | 0 |
| RefSeq | XP_021313038.1 | serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X2 [Sorghum bicolor] | 0 |
| Q39247 | Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform OS=Arabidopsis thaliana OX=3702 GN=PP2AB2 PE=1 SV=1 | 0 | |
| TrEMBL | C5XQ76 | Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B OS=Sorghum bicolor OX=4558 GN=SORBI_3003G209200 PE=3 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology