Basic Information
Locus ID:
gene-QOZ80_1BG0071740
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1B | 48402867 | 48406422 | - | gene-QOZ80_1BG0071740 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.87 | 73,626.02 Da | 44.81 | 93.95 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 435 | 699 | 1.99471E-87 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 38 | 77 | 8.0E-8 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 152 | 212 | 2.5E-9 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 442 | 699 | 1.9E-34 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 40 | 244 | 9.83E-43 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 433 | 699 | 1.42E-50 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 39 | 150 | 3.0E-24 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 153 | 266 | 2.0E-31 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 392 | 504 | 7.0E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 505 | 702 | 4.0E-39 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 426 | 702 | 27.015034 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G51560.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_039847932.1 | LRR receptor kinase SERK2-like [Panicum virgatum] | 0 |
| Q9FFW5 | Proline-rich receptor-like protein kinase PERK8 OS=Arabidopsis thaliana OX=3702 GN=PERK8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T0SN57 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_5KG339500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology