Basic Information
Locus ID:
gene-QOZ80_1BG0070830
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1B | 46155577 | 46156554 | - | gene-QOZ80_1BG0070830 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.31 | 36,784.31 Da | 36.95 | 92.28 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 19 | 144 | 1.17186E-15 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 173 | 285 | 1.2E-20 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 16 | 150 | 1.05E-18 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 158 | 285 | 3.14E-28 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 16 | 147 | 5.3E-17 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 157 | 283 | 2.7E-33 | IPR011333 |
| Gene3D | G3DSA:6.10.250.3030 | - | 286 | 323 | 2.2E-13 | - |
| SMART | SM00225 | BTB_4 | 181 | 289 | 1.3E-17 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 181 | 248 | 16.507282 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 18 | 143 | 11.748451 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G39760.2 | BTB/POZ/MATH-domains containing protein. | 0 |
| RefSeq | XP_004974331.1 | BTB/POZ and MATH domain-containing protein 1 [Setaria italica] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9W3H1 | BTB domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_08896 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology