Basic Information
Locus ID:
gene-QOZ80_1BG0064400
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Short Name:
NIN1
Description:
Alkaline and neutral invertase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1B | 14215447 | 14219111 | + | gene-QOZ80_1BG0064400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.41 | 70,335.38 Da | 51.09 | 82.27 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12899 | Alkaline and neutral invertase | 149 | 590 | 2.4E-221 | IPR024746 |
| SUPERFAMILY | SSF48208 | Six-hairpin glycosidases | 145 | 594 | 3.7E-57 | IPR008928 |
| Gene3D | G3DSA:1.50.10.10 | - | 175 | 583 | 1.9E-15 | IPR012341 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 115 | 145 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56560.1 | Plant neutral invertase family protein. | 0 |
| RefSeq | XP_004968681.1 | neutral/alkaline invertase 1, mitochondrial [Setaria italica] | 0 |
| Q10MC0 | Neutral/alkaline invertase 1, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=NIN1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9UBX2 | Alkaline/neutral invertase OS=Eragrostis curvula OX=38414 GN=EJB05_30668 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology