Basic Information
Locus ID:
gene-QOZ80_1BG0059150
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Belongs to the TPP enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1B | 7092567 | 7095659 | - | gene-QOZ80_1BG0059150 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.78 | 64,327.45 Da | 32.69 | 85.99 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd07038 | TPP_PYR_PDC_IPDC_like | 35 | 199 | 7.19616E-90 | - |
| CDD | cd02005 | TPP_PDC_IPDC | 397 | 579 | 1.64263E-84 | - |
| Pfam | PF00205 | Thiamine pyrophosphate enzyme, central domain | 232 | 349 | 4.9E-22 | IPR012000 |
| Pfam | PF02775 | Thiamine pyrophosphate enzyme, C-terminal TPP binding domain | 443 | 567 | 4.6E-17 | IPR011766 |
| Pfam | PF02776 | Thiamine pyrophosphate enzyme, N-terminal TPP binding domain | 32 | 203 | 3.7E-35 | IPR012001 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 397 | 591 | 2.14E-45 | IPR029061 |
| SUPERFAMILY | SSF52467 | DHS-like NAD/FAD-binding domain | 227 | 373 | 7.3E-34 | IPR029035 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 32 | 214 | 1.05E-42 | IPR029061 |
| Gene3D | G3DSA:3.40.50.970 | - | 29 | 208 | 8.4E-60 | - |
| Gene3D | G3DSA:3.40.50.970 | - | 391 | 578 | 5.8E-59 | - |
| Gene3D | G3DSA:3.40.50.1220 | - | 222 | 384 | 7.9E-44 | - |
| PIRSF | PIRSF036565 | Pyruvt_ip_decrb | 26 | 591 | 3.2E-214 | IPR012110 |
| Coils | Coil | Coil | 169 | 189 | - | - |
Gene Ontology
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01320.1 | Thiamine pyrophosphate dependent pyruvate decarboxylase family protein. | 0 |
| RefSeq | XP_004968281.1 | pyruvate decarboxylase 1 [Setaria italica] | 0 |
| A2XFI3 | Pyruvate decarboxylase 2 OS=Oryza sativa subsp. indica OX=39946 GN=PDC2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5J9UF07 | pyruvate decarboxylase OS=Eragrostis curvula OX=38414 GN=EJB05_31362 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology