Basic Information
Locus ID:
gene-QOZ80_1BG0058470
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1B | 6645024 | 6649232 | + | gene-QOZ80_1BG0058470 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.56 | 57,563.19 Da | 37.27 | 82.98 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 2 | 235 | 6.5E-40 | IPR000719 |
| Pfam | PF00400 | WD domain, G-beta repeat | 338 | 368 | 0.0061 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 300 | 485 | 1.12E-37 | IPR036322 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 2 | 241 | 9.98E-56 | IPR011009 |
| Gene3D | G3DSA:2.130.10.10 | - | 259 | 427 | 6.0E-30 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 428 | 489 | 4.1E-7 | IPR015943 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 258 | 7.6E-60 | - |
| SMART | SM00320 | WD40_4 | 415 | 453 | 83.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 288 | 326 | 0.16 | IPR001680 |
| SMART | SM00320 | WD40_4 | 455 | 493 | 19.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 372 | 412 | 0.012 | IPR001680 |
| SMART | SM00320 | WD40_4 | 329 | 368 | 2.4E-4 | IPR001680 |
| SMART | SM00220 | serkin_6 | 1 | 236 | 9.0E-11 | IPR000719 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 336 | 368 | 12.045688 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 336 | 368 | 10.047417 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 241 | 31.622717 | IPR000719 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 379 | 421 | 9.071468 | IPR001680 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 89 | 101 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32700.6 | LEUNIG_homolog. Encodes a WD40 repeat and LUFS domain containing protein that is similar to LUG. Interacts physically with SEUSS and likely functions as part of a repressor complex that represses AG. | 0 |
| RefSeq | XP_039802222.1 | probable serine/threonine-protein kinase PBL12 isoform X1 [Panicum virgatum] | 0 |
| O48847 | Transcriptional corepressor LEUNIG_HOMOLOG OS=Arabidopsis thaliana OX=3702 GN=LUH PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T0UBG5 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_3NG251500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology