halophFGD

Basic Information

Locus ID: gene-QOZ80_1BG0057520

Species & Taxonomic ID: Eleusine coracana subsp. coracana & 191504

Genome Assembly: GCA_032690845.1

Description: Wall-associated receptor kinase C-terminal

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr1B	5737442	5740690	-	gene-QOZ80_1BG0057520

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.07	65,469.82 Da	54.41	83.77	-0.01

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF14380	Wall-associated receptor kinase C-terminal	503	589	1.1E-10	IPR032872
Pfam	PF14380	Wall-associated receptor kinase C-terminal	186	252	4.2E-10	IPR032872
Pfam	PF13947	Wall-associated receptor kinase galacturonan-binding	36	111	1.2E-15	IPR025287
Pfam	PF13947	Wall-associated receptor kinase galacturonan-binding	380	443	8.1E-14	IPR025287

Gene Ontology

Molecular Function:

GO:0030247 (polysaccharide binding)

Best hit

Source	Best Hit ID	Description
TAIR	AT1G18390.2	Protein kinase superfamily protein.
RefSeq	XP_012701767.2	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.1 [Setaria italica]
Swiss-Prot	P0C5E2	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 OS=Arabidopsis thaliana OX=3702 GN=LRK10L-1.2 PE=2 SV=3
TrEMBL	Q943E1	Uncharacterized protein P0443D08.14 OS=Oryza sativa subsp. japonica OX=39947 GN=P0443D08.14 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Anacardiaceae	Pistacia vera	1	pistato.v30233140
Apiaceae	Apium graveolens	2	Ag3G00953, Ag3G00960
Arecaceae	Cocos nucifera	2	COCNU_06G009210, scaffold003228G000020
Arecaceae	Phoenix dactylifera	2	gene-LOC113463076, gene-LOC120110545
Asteraceae	Flaveria trinervia	1	Ftri16G08023
Hydrocharitaceae	Thalassia testudinum	1	gene.Thate03g00980
Poaceae	Echinochloa crus-galli	15	AH02.1557, AH02.2812, AH02.2813, AH02.2814, AH02.2818 ... AH02.758, BH02.2900, BH02.2901, BH02.2902, BH02.2904, BH02.2905, BH02.753, CH02.3636, CH02.851, CH05.3597
Poaceae	Eleusine coracana subsp. coracana	7	gene-QOZ80_1AG0029180, gene-QOZ80_1AG0029190 ... gene-QOZ80_1AG0029210, gene-QOZ80_1AG0029240, gene-QOZ80_1BG0057520, gene-QOZ80_1BG0079400, gene-QOZ80_5AG0364270
Poaceae	Hordeum vulgare	7	HORVU.MOREX.r3.3HG0225430.1.CDS1 ... HORVU.MOREX.r3.3HG0281260.1.CDS1, HORVU.MOREX.r3.3HG0281270.1.CDS1, HORVU.MOREX.r3.3HG0281280.1, HORVU.MOREX.r3.3HG0281310.1, HORVU.MOREX.r3.3HG0281320.1.CDS1, HORVU.MOREX.r3.3HG0281330.1
Poaceae	Lolium multiflorum	5	gene-QYE76_003721, gene-QYE76_054651, gene-QYE76_054652 ... gene-QYE76_054664, gene-QYE76_054667
Poaceae	Oryza coarctata	4	Oco01G017760, Oco01G017770, Oco01G017790, Oco10G015840
Poaceae	Oryza sativa	3	LOC_Os01g04440.1, LOC_Os01g49560.1, LOC_Os01g49600.1
Poaceae	Paspalum vaginatum	10	gene-BS78_03G072700, gene-BS78_03G233200 ... gene-BS78_03G233300, gene-BS78_03G233400, gene-BS78_03G237100, gene-BS78_03G237400, gene-BS78_03G237600, gene-BS78_03G237700, gene-BS78_03G238200, gene-BS78_09G226100
Poaceae	Puccinellia tenuiflora	1	Pt_Chr0602421
Poaceae	Sporobolus alterniflorus	6	Chr02G012220, Chr02G023950, Chr03G003840, Chr03G013910 ... Chr05G001930, Chr22G002110
Poaceae	Thinopyrum elongatum	2	Tel3E01G086500, Tel3E01G436000
Poaceae	Triticum dicoccoides	5	gene_TRIDC2AG071890, gene_TRIDC2AG071920 ... gene_TRIDC2AG071940, gene_TRIDC3AG039100, gene_TRIDC3BG044280
Poaceae	Triticum aestivum	7	TraesCS2B02G539800.1, TraesCS2D02G512845.1 ... TraesCS2D02G512900.1, TraesCS2D02G513200.1.cds1, TraesCS3A02G262000.1, TraesCS3B02G295300.1, TraesCS3D02G262000.1
Poaceae	Zoysia japonica	7	nbis-gene-12975, nbis-gene-24946, nbis-gene-26165 ... nbis-gene-26166, nbis-gene-26167, nbis-gene-56350, nbis-gene-56701
Poaceae	Zoysia macrostachya	3	Zma_g10920, Zma_g10921, Zma_g7575
Posidoniaceae	Posidonia oceanica	1	gene.Posoc04g02900
Rhizophoraceae	Bruguiera sexangula	3	evm.TU.Scaffold_18_RagTag.528, evm.TU.Scaffold_3_RagTag.652 ... evm.TU.Scaffold_4_RagTag.741
Rhizophoraceae	Carallia pectinifolia	2	nbisL1-mrna-1321, nbisL1-mrna-28615
Rhizophoraceae	Ceriops tagal	1	nbisL1-mrna-4972
Rhizophoraceae	Kandelia candel	1	add.evm.TU.utg000019l.347
Rhizophoraceae	Rhizophora apiculata	3	nbisL1-mrna-18838, nbisL1-mrna-22570, nbisL1-mrna-22576
Rhizophoraceae	Rhizophora mangle	1	nbisL1-mrna-19237
Salicaceae	Populus euphratica	2	populus_peu20810, populus_peu20825
Solanaceae	Lycium barbarum	1	gene-LOC132601598
Solanaceae	Solanum chilense	2	SOLCI003031700, SOLCI005596100
Solanaceae	Solanum pennellii	1	gene-LOC107006244