Basic Information
Locus ID:
gene-QOZ80_1BG0056120
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1B | 4847296 | 4850913 | - | gene-QOZ80_1BG0056120 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.42 | 95,499.65 Da | 38.03 | 66.55 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF05699 | hAT family C-terminal dimerisation region | 597 | 665 | 2.7E-9 | IPR008906 |
| Pfam | PF04937 | Protein of unknown function (DUF 659) | 315 | 464 | 2.4E-47 | IPR007021 |
| SUPERFAMILY | SSF53098 | Ribonuclease H-like | 344 | 667 | 8.34E-43 | IPR012337 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 765 | 779 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 194 | 229 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 780 | 827 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 40 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 7 | 38 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 195 | 229 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 765 | 853 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17450.1 | hAT dimerisation domain-containing protein. | 0 |
| RefSeq | XP_008649623.2 | uncharacterized protein LOC103630337 [Zea mays] | 0 |
| TrEMBL | A0A8T0T8G3 | BED-type domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_4NG292738 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 6 | BH01.4753, BH06.686, BH08.2468, BH08.2472, CH05.2087 ... |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_1BG0056120, gene-QOZ80_4BG0351070 ... |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_048311, gene-QYE76_055843 |
| Poaceae | Paspalum vaginatum | 15 | gene-BS78_03G023900, gene-BS78_03G199100, gene-BS78_K224500 ... |
| Poaceae | Sporobolus alterniflorus | 11 | Chr03G013220, Chr03G013230, Chr03G013240, Chr05G004880 ... |