Basic Information
Locus ID:
gene-QOZ80_1BG0055280
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1B | 4185547 | 4187160 | + | gene-QOZ80_1BG0055280 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.05 | 27,622.17 Da | 35.18 | 105.99 | 0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 69 | 91 | 0.2 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 52 | 4.3E-4 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 216 | 237 | 0.46 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 142 | 201 | 2.8E-8 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 66 | 248 | 1.28E-47 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 155 | 4.9E-31 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 156 | 253 | 1.5E-28 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 213 | 237 | 100.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 164 | 187 | 40.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 188 | 212 | 170.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 116 | 140 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 67 | 91 | 10.0 | IPR003591 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_037494577.1 | LOW QUALITY PROTEIN: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Jatropha curcas] | 0 |
| TrEMBL | A0A0A9HJ25 | LRRNT_2 domain-containing protein OS=Arundo donax OX=35708 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah036118 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_9g209520 |
| Apiaceae | Apium graveolens | 1 | Ag11G03669 |
| Brassicaceae | Brassica nigra | 1 | BniB04g047740.2N |
| Casuarinaceae | Casuarina glauca | 1 | Cgl09G0774 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00013418 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_1BG0055280 |
| Poaceae | Oryza coarctata | 1 | Oco03G010770 |
| Poaceae | Oryza sativa | 1 | LOC_Os06g13330.1 |
| Poaceae | Triticum dicoccoides | 3 | gene_TRIDC2AG005730, gene_TRIDC6AG044300 ... |
| Poaceae | Triticum aestivum | 1 | TraesCS5D02G077200.2 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-7939 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-2877 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-7737, nbisL1-mrna-9073 |
| Salicaceae | Populus euphratica | 1 | populus_peu32284 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_5484 |
| Zosteraceae | Zostera marina | 1 | Zosma03g29380.v3.1 |