Basic Information
Locus ID:
gene-QOZ80_1BG0054960
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1B | 3923066 | 3925912 | - | gene-QOZ80_1BG0054960 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.98 | 100,735.05 Da | 40.24 | 104.59 | 0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 676 | 944 | 4.42086E-87 | - |
| Pfam | PF13855 | Leucine rich repeat | 157 | 215 | 8.0E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 27 | 68 | 2.5E-9 | IPR013210 |
| Pfam | PF13516 | Leucine Rich repeat | 120 | 135 | 0.25 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 672 | 941 | 5.5E-42 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 493 | 551 | 1.7E-10 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 85 | 557 | 2.89E-52 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 248 | 408 | 6.8E-14 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 647 | 941 | 1.62E-72 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 147 | 246 | 1.8E-19 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 631 | 745 | 5.7E-27 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 146 | 2.5E-24 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 373 | 583 | 7.3E-37 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 247 | 365 | 7.8E-16 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 746 | 946 | 8.3E-59 | - |
| SMART | SM00220 | serkin_6 | 670 | 944 | 3.5E-37 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 670 | 948 | 38.011284 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 676 | 698 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 790 | 802 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 312 | 325 | 3.3E-6 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 514 | 527 | 3.3E-6 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02130.2 | - | 0 |
| RefSeq | XP_025818181.1 | LRR receptor-like serine/threonine-protein kinase RPK2 [Panicum hallii] | 0 |
| Q9S7I6 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana OX=3702 GN=RPK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2S3HXK3 | Protein kinase domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_5G439300 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology