Basic Information
Locus ID:
gene-QOZ80_1BG0051130
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1B | 1567746 | 1569005 | + | gene-QOZ80_1BG0051130 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.33 | 46,539.82 Da | 74.05 | 77.30 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 27 | 64 | 6.5E-7 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 19 | 73 | 1.2E-10 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 21 | 59 | 8.0E-8 | - |
| SMART | SM00256 | fbox_2 | 23 | 63 | 1.1E-4 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 372 | 419 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 190 | 211 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 174 | 211 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 175 | 189 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 396 | 412 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_024315490.1 | uncharacterized protein LOC112270947 [Brachypodium distachyon] | 0 |
| TrEMBL | A0A5J9UI33 | F-box domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_32523 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | BH02.268 |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_1AG0002530, gene-QOZ80_1AG0002540 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.1HG0016100.1.CDS1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_010312 |
| Poaceae | Oryza coarctata | 2 | Oco10G001490, Oco15G007890 |
| Poaceae | Oryza sativa | 1 | LOC_Os08g31270.1 |
| Poaceae | Triticum aestivum | 4 | TraesCS1B02G237800.1.cds1, TraesCS1B02G237900.1.cds1 ... |