Basic Information
Locus ID:
gene-QOZ80_1BG0049080
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Belongs to the ubiquitin-conjugating enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1B | 307306 | 310797 | - | gene-QOZ80_1BG0049080 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.81 | 50,654.29 Da | 47.25 | 61.70 | -0.70 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00195 | UBCc | 178 | 305 | 1.24876E-38 | IPR000608 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 180 | 325 | 1.0E-25 | IPR000608 |
| SUPERFAMILY | SSF54495 | UBC-like | 157 | 344 | 2.88E-45 | IPR016135 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 138 | 391 | 1.9E-89 | IPR016135 |
| SMART | SM00212 | ubc_7 | 179 | 336 | 1.1E-26 | - |
| ProSiteProfiles | PS50127 | Ubiquitin-conjugating (UBC) core domain profile. | 176 | 336 | 38.647915 | IPR000608 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 89 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 30 | 59 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 385 | 411 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 391 | 411 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 65 | 89 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53025.1 | Ubiquitin-conjugating enzyme family protein. | 0 |
| RefSeq | XP_025816619.1 | putative ubiquitin-conjugating enzyme E2 38 [Panicum hallii] | 0 |
| Q8GY87 | Probable ubiquitin-conjugating enzyme E2 26 OS=Arabidopsis thaliana OX=3702 GN=UBC26 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5J9UH11 | UBC core domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_32741 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology