Basic Information
Locus ID:
gene-QOZ80_1BG0048710
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1B | 110166 | 113552 | - | gene-QOZ80_1BG0048710 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.54 | 118,486.00 Da | 39.37 | 100.01 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 567 | 625 | 4.6E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 297 | 357 | 1.1E-8 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 770 | 1057 | 2.8E-39 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 466 | 526 | 4.7E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 159 | 207 | 1.8E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 61 | 104 | 7.1E-9 | IPR013210 |
| Pfam | PF13516 | Leucine Rich repeat | 245 | 261 | 1.6 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 117 | 440 | 4.79E-56 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 421 | 672 | 2.04E-48 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 757 | 1057 | 5.13E-72 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 750 | 866 | 3.3E-21 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 60 | 259 | 1.9E-40 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 260 | 368 | 5.4E-29 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 369 | 682 | 4.4E-80 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 867 | 1074 | 3.2E-59 | - |
| SMART | SM00369 | LRR_typ_2 | 244 | 271 | 92.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 489 | 512 | 270.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 295 | 319 | 24.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 768 | 1078 | 5.7E-32 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 194 | 217 | 26.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 344 | 368 | 0.98 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 612 | 635 | 76.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 136 | 160 | 360.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 768 | 1078 | 35.156216 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 910 | 922 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 774 | 797 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 0 |
| RefSeq | XP_034595391.1 | receptor-like protein kinase HSL1 [Setaria viridis] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A4U6UBT9 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_5G002800v2 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology