Basic Information
Locus ID:
gene-QOZ80_1AG0048420
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
PWWP domain
Maps and Mapping Data
| Chromosome/Scaffold | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1A | 57426240 | 57428921 | - | gene-QOZ80_1AG0048420 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.42 | 97,183.63 Da | 53.74 | 60.74 | -0.83 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05162 | PWWP | 81 | 167 | 7.78141E-32 | - |
| Pfam | PF00855 | PWWP domain | 81 | 152 | 8.8E-13 | IPR000313 |
| SUPERFAMILY | SSF54928 | RNA-binding domain, RBD | 800 | 851 | 4.62E-5 | IPR035979 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 78 | 194 | 1.32E-24 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 70 | 174 | 2.7E-20 | - |
| SMART | SM00293 | PWWP_4 | 81 | 142 | 7.3E-7 | IPR000313 |
| ProSiteProfiles | PS50812 | PWWP domain profile. | 83 | 144 | 12.967793 | IPR000313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 534 | 548 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 556 | 579 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 366 | 382 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 279 | 309 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 873 | 893 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 751 | 766 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 735 | 750 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 663 | 690 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 447 | 470 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 417 | 446 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 716 | 772 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 318 | 332 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 669 | 690 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 279 | 601 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 506 | 533 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 36 | 50 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 383 | 399 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 67 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G09670.1 | Tudor/PWWP/MBT superfamily protein. | 0 |
| RefSeq | XP_021312812.1 | uncharacterized protein LOC110433943 [Sorghum bicolor] | 0 |
| Q9SF36 | PWWP domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=PDP2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9VNP3 | PWWP domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_19031 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology