Basic Information
Locus ID:
gene-QOZ80_1AG0047980
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Protein-only RNase P
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1A | 57166100 | 57168646 | - | gene-QOZ80_1AG0047980 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.59 | 62,233.49 Da | 50.20 | 76.83 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 36 | 244 | 1.1E-70 | IPR033443 |
| Pfam | PF16953 | Protein-only RNase P | 287 | 513 | 2.0E-57 | IPR031595 |
| Gene3D | G3DSA:3.40.50.11980 | - | 303 | 479 | 1.3E-188 | - |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 44 | 514 | 1.3E-188 | IPR011990 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 50 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 525 | 545 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G16650.1 | proteinaceous RNase P 2. | 0 |
| RefSeq | XP_034595849.1 | proteinaceous RNase P 2 [Setaria viridis] | 0 |
| Q680B9 | Proteinaceous RNase P 2 OS=Arabidopsis thaliana OX=3702 GN=PRORP2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9VNJ9 | ribonuclease P (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_18977 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology