HalophFGD

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Basic Information
Locus ID: gene-QOZ80_1AG0045470
Species & Taxonomic ID: Eleusine coracana subsp. coracana & 191504
Genome Assembly: GCA_032690845.1
Description: protein heterodimerization activity
Maps and Mapping Data
Chromosome Start End Strand ID
chr1A 55649358 55650629 - gene-QOZ80_1AG0045470
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
7.61 47,586.57 Da 42.84 79.31 -0.18
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF12937 F-box-like 16 53 3.4E-6 IPR001810
SUPERFAMILY SSF81383 F-box domain 10 67 6.54E-12 IPR036047
Gene3D G3DSA:1.20.1280.50 - 16 56 2.3E-7 -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_039812140.1 uncharacterized protein LOC120675117 [Panicum virgatum] 0
TrEMBL A0A5J9TPU7 F-box domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_40402 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 15 AH02.4407, AH02.4459, BH01.1168, BH02.4439, BH02.4440 ...
BH02.4441, BH02.4442, BH02.4502, BH02.4503, BH05.1917, CH01.1220, CH02.4492, CH02.4551, CH02.4552, CH02.4553
Poaceae Eleusine coracana subsp. coracana 4 gene-QOZ80_1AG0045470, gene-QOZ80_1AG0045480 ...
gene-QOZ80_8AG0623040, gene-QOZ80_8BG0651020
Poaceae Oryza coarctata 4 Oco01G002080, Oco02G002070, Oco02G002100, Oco02G003320
Poaceae Oryza sativa 2 LOC_Os01g05880.1, LOC_Os01g05890.1
Poaceae Paspalum vaginatum 5 gene-BS78_01G264100, gene-BS78_03G398000, gene-BS78_K095000 ...
gene-BS78_03G398100, gene-BS78_04G250900
Poaceae Puccinellia tenuiflora 3 Pt_Chr0205593, Pt_Chr0205600, Pt_Chr0205696
Poaceae Thinopyrum elongatum 1 Tel7E01G830700
Poaceae Triticum aestivum 2 TraesCS7B02G392200.1.cds1, TraesCSU02G244400.1.cds1
Poaceae Zea mays 2 Zm00001eb298720_P001, Zm00001eb298750_P001
Poaceae Zoysia japonica 1 nbis-gene-10900
Poaceae Zoysia macrostachya 1 Zma_g9325
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.