Basic Information
Locus ID:
gene-QOZ80_1AG0039190
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
cation transmembrane transporter activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1A | 51685984 | 51690048 | - | gene-QOZ80_1AG0039190 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.15 | 45,718.79 Da | 46.10 | 100.68 | 0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF16916 | Dimerisation domain of Zinc Transporter | 324 | 395 | 1.0E-13 | IPR027470 |
| Pfam | PF01545 | Cation efflux family | 122 | 315 | 9.9E-30 | IPR002524 |
| SUPERFAMILY | SSF161111 | Cation efflux protein transmembrane domain-like | 116 | 316 | 1.2E-39 | IPR027469 |
| SUPERFAMILY | SSF160240 | Cation efflux protein cytoplasmic domain-like | 318 | 396 | 9.81E-18 | IPR036837 |
| Gene3D | G3DSA:3.30.70.1350 | Cation efflux protein, cytoplasmic domain | 317 | 397 | 3.7E-19 | IPR036837 |
| Gene3D | G3DSA:1.20.1510.10 | Cation efflux protein transmembrane domain | 120 | 314 | 2.9E-41 | IPR027469 |
| TIGRFAM | TIGR01297 | CDF: cation diffusion facilitator family transporter | 121 | 396 | 3.5E-32 | IPR002524 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G39450.1 | Cation efflux family protein. Encodes a Golgi-localized manganese transporter that is involved in Mn tolerance. When expressed into yeast cells, this gene confer Mn<sup>2+</sup> and Cu<sup>2+</sup> tolerance. | 0 |
| RefSeq | XP_008674849.1 | metal tolerance protein 5 isoform X1 [Zea mays] | 0 |
| Q5NA18 | Metal tolerance protein 5 OS=Oryza sativa subsp. japonica OX=39947 GN=MTP5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A835C7Y7 | ZT_dimer domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_026053 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology