Basic Information
Locus ID:
gene-QOZ80_1AG0035380
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Jacalin-like lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1A | 48956616 | 48959658 | - | gene-QOZ80_1AG0035380 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.90 | 63,692.75 Da | 34.12 | 72.08 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 443 | 569 | 1.90786E-40 | IPR033734 |
| CDD | cd09612 | Jacalin | 22 | 150 | 1.33375E-42 | IPR033734 |
| CDD | cd09612 | Jacalin | 253 | 382 | 5.94375E-37 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 253 | 382 | 8.7E-26 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 440 | 569 | 7.0E-28 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 22 | 150 | 1.6E-30 | IPR001229 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 427 | 569 | 1.07E-39 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 238 | 382 | 1.31E-38 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 11 | 150 | 5.49E-42 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 232 | 382 | 4.2E-45 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 4 | 151 | 2.2E-53 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 423 | 569 | 2.4E-49 | IPR036404 |
| SMART | SM00915 | Jacalin_2 | 440 | 570 | 4.0E-37 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 22 | 152 | 4.6E-41 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 253 | 384 | 1.9E-37 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 242 | 384 | 46.021675 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 429 | 570 | 48.713505 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 11 | 152 | 48.600956 | IPR001229 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G19715.1 | Mannose-binding lectin superfamily protein. | 0 |
| RefSeq | XP_025819306.1 | jacalin-related lectin 3 [Panicum hallii] | 0 |
| F4HQX1 | Jacalin-related lectin 3 OS=Arabidopsis thaliana OX=3702 GN=JAL3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9VHD9 | Jacalin-type lectin domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_16773 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology