Basic Information
Locus ID:
gene-QOZ80_1AG0035170
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Short Name:
HMT3
Description:
Homocysteine S-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1A | 48839394 | 48841038 | - | gene-QOZ80_1AG0035170 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.08 | 34,853.74 Da | 44.76 | 92.81 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02574 | Homocysteine S-methyltransferase | 231 | 301 | 3.5E-15 | IPR003726 |
| Pfam | PF02574 | Homocysteine S-methyltransferase | 22 | 224 | 9.7E-45 | IPR003726 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 18 | 304 | 2.22E-69 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 226 | 310 | 2.3E-21 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 14 | 225 | 7.2E-60 | IPR036589 |
| PIRSF | PIRSF037505 | BHMT | 258 | 313 | 0.38 | IPR017226 |
| PIRSF | PIRSF037505 | BHMT | 163 | 225 | 420.0 | IPR017226 |
| PIRSF | PIRSF037505 | BHMT | 13 | 141 | 4.0E-7 | IPR017226 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 9 | 320 | 28.763008 | IPR003726 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G63250.1 | homocysteine methyltransferase 2. Encodes a homocysteine methyltransferase (HMT). Among the three HMT coding genes in the genome, HMT2 is responsible for a significant proportion of HMT activity in the flower stalks and silique hulls. However, HMT2 does not significantly contribute to the total HMT activity in seeds. | 0 |
| RefSeq | XP_002458576.1 | homocysteine S-methyltransferase 4 [Sorghum bicolor] | 0 |
| Q9FUM7 | Homocysteine S-methyltransferase 4 OS=Zea mays OX=4577 GN=HMT-4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9VFV0 | Hcy-binding domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_16781 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology