Basic Information
Locus ID:
gene-QOZ80_1AG0034520
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1A | 48406331 | 48407404 | + | gene-QOZ80_1AG0034520 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.55 | 40,302.23 Da | 48.91 | 93.19 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 168 | 214 | 1.1E-5 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 160 | 221 | 4.06E-11 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 161 | 251 | 6.1E-8 | - |
| SMART | SM00256 | fbox_2 | 170 | 213 | 0.0013 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 164 | 213 | 11.060639 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 318 | 357 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_002467378.1 | uncharacterized protein LOC8083603 [Sorghum bicolor] | 0 |
| TrEMBL | A0A1E5V7D5 | F-box domain-containing protein OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0017900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | BH01.2957, CH01.3154 |
| Poaceae | Eleusine coracana subsp. coracana | 5 | gene-QOZ80_1AG0034520, gene-QOZ80_5AG0375060 ... |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_03G194300 |
| Poaceae | Sporobolus alterniflorus | 6 | Chr01G021480, Chr02G008650, Chr05G024830, Chr08G017020 ... |
| Poaceae | Zea mays | 2 | Zm00001eb224500_P001, Zm00001eb224510_P001 |
| Poaceae | Zoysia japonica | 5 | nbis-gene-23678, nbis-gene-23679, nbis-gene-23680 ... |
| Poaceae | Zoysia macrostachya | 2 | Zma_g28150, Zma_g28151 |