Basic Information
Locus ID:
gene-QOZ80_1AG0025190
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
ATPase family associated with various cellular activities (AAA)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1A | 40349349 | 40353940 | + | gene-QOZ80_1AG0025190 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.40 | 93,655.47 Da | 38.61 | 88.88 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 514 | 651 | 1.66283E-20 | - |
| Pfam | PF00004 | ATPase family associated with various cellular activities (AAA) | 520 | 650 | 4.7E-35 | IPR003959 |
| Pfam | PF17862 | AAA+ lid domain | 672 | 712 | 5.6E-8 | IPR041569 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 480 | 709 | 9.85E-54 | IPR027417 |
| Gene3D | G3DSA:1.10.8.60 | - | 652 | 735 | 1.2E-86 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 479 | 738 | 1.2E-86 | IPR027417 |
| SMART | SM00382 | AAA_5 | 516 | 653 | 5.6E-18 | IPR003593 |
| ProSitePatterns | PS00674 | AAA-protein family signature. | 623 | 642 | - | IPR003960 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 773 | 790 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 708 | 790 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 708 | 757 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28000.1 | P-loop containing nucleoside triphosphate hydrolases superfamily protein. | 0 |
| RefSeq | XP_004969211.1 | ribosome biogenesis ATPase RIX7 isoform X2 [Setaria italica] | 0 |
| Q6NW58 | Spastin OS=Danio rerio OX=7955 GN=spast PE=2 SV=2 | 0 | |
| TrEMBL | A0A835KTK8 | AAA domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_002878 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology