Basic Information
Locus ID:
gene-QOZ80_1AG0021060
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1A | 33724730 | 33725800 | + | gene-QOZ80_1AG0021060 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.36 | 39,836.78 Da | 37.57 | 90.59 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 19 | 144 | 8.01677E-18 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 173 | 288 | 2.2E-23 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 16 | 150 | 2.29E-20 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 158 | 288 | 4.4E-30 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 16 | 147 | 8.9E-18 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 159 | 289 | 1.1E-34 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 290 | 355 | 1.2E-18 | - |
| SMART | SM00225 | BTB_4 | 181 | 289 | 1.9E-21 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 18 | 143 | 13.384899 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 181 | 248 | 17.437971 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_004974331.1 | BTB/POZ and MATH domain-containing protein 1 [Setaria italica] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9W3H1 | BTB domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_08896 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology