Basic Information
Locus ID:
gene-QOZ80_1AG0019950
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Domain of unknown function (DUF3403)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1A | 31395142 | 31400283 | - | gene-QOZ80_1AG0019950 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.55 | 92,499.99 Da | 46.83 | 90.02 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 377 | 644 | 1.0936E-91 | - |
| Pfam | PF01657 | Salt stress response/antifungal | 34 | 131 | 2.5E-16 | IPR002902 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 374 | 643 | 1.6E-46 | IPR001245 |
| Pfam | PF01657 | Salt stress response/antifungal | 198 | 264 | 4.4E-7 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 352 | 669 | 2.16E-81 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 179 | 266 | 1.6E-12 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 447 | 652 | 4.7E-57 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 31 | 132 | 8.0E-20 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 337 | 446 | 3.7E-37 | - |
| SMART | SM00220 | serkin_6 | 371 | 643 | 5.2E-30 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 371 | 658 | 38.505974 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 28 | 134 | 17.140602 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 155 | 267 | 13.121469 | IPR002902 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 493 | 505 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 743 | 765 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23280.2 | - | 0 |
| RefSeq | XP_012701442.1 | cysteine-rich receptor-like protein kinase 15 [Setaria italica] | 0 |
| O65479 | Putative cysteine-rich receptor-like protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=CRK20 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5J9VEY9 | Cysteine-rich receptor-like protein kinase 25 (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_15807 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | BH02.1996, CH02.2153 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_1AG0019950, gene-QOZ80_1BG0069640 |
| Poaceae | Oryza coarctata | 1 | Oco01G012050 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr24G009140 |