Basic Information
Locus ID:
gene-QOZ80_1AG0014690
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Protein of unknown function (DUF295)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1A | 13388369 | 13391552 | + | gene-QOZ80_1AG0014690 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.76 | 60,551.50 Da | 34.72 | 80.70 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 16 | 51 | 4.9E-4 | IPR001810 |
| Pfam | PF03478 | Protein of unknown function (DUF295) | 333 | 391 | 2.1E-7 | IPR005174 |
| SUPERFAMILY | SSF57850 | RING/U-box | 423 | 472 | 8.24E-7 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 11 | 54 | 7.06E-7 | IPR036047 |
| SUPERFAMILY | SSF63829 | Calcium-dependent phosphotriesterase | 95 | 291 | 2.29E-5 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 421 | 472 | 1.7E-8 | IPR013083 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_034598267.1 | putative F-box protein At4g17565 [Setaria viridis] | 0 |
| TrEMBL | A0A5J9UCI8 | DUF295 domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_30808 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 18 | AH02.1462, AH05.3101, AH06.1727, AH09.2454, AH09.2531 ... |
| Poaceae | Eleusine coracana subsp. coracana | 7 | gene-QOZ80_1AG0014690, gene-QOZ80_1AG0014700 ... |
| Poaceae | Lolium multiflorum | 5 | gene-QYE76_049542, gene-QYE76_059872, gene-QYE76_059876 ... |
| Poaceae | Paspalum vaginatum | 3 | gene-BS78_06G227700, gene-BS78_06G262500 ... |
| Poaceae | Sporobolus alterniflorus | 3 | Chr17G013480, Chr23G002270, Chr26G017100 |
| Poaceae | Zea mays | 3 | Zm00001eb068140_P001, Zm00001eb171130_P001 ... |
| Poaceae | Zoysia japonica | 3 | nbis-gene-12239, nbis-gene-23041, nbis-gene-6051 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g20571, Zma_g22113 |