Basic Information
Locus ID:
gene-QOZ80_1AG0011520
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
ABC transporter C family member 3
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1A | 8829601 | 8833530 | + | gene-QOZ80_1AG0011520 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.00 | 129,495.31 Da | 42.11 | 99.49 | 0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18579 | ABC_6TM_ABCC_D1 | 331 | 618 | 2.08472E-85 | IPR044746 |
| CDD | cd03250 | ABCC_MRP_domain1 | 644 | 844 | 2.68512E-97 | - |
| CDD | cd18580 | ABC_6TM_ABCC_D2 | 948 | 1190 | 6.20556E-74 | IPR044726 |
| Pfam | PF00005 | ABC transporter | 662 | 796 | 4.2E-19 | IPR003439 |
| Pfam | PF00664 | ABC transporter transmembrane region | 950 | 1190 | 6.4E-31 | IPR011527 |
| Pfam | PF00664 | ABC transporter transmembrane region | 334 | 597 | 1.0E-19 | IPR011527 |
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 935 | 1190 | 2.75E-44 | IPR036640 |
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 320 | 626 | 1.02E-30 | IPR036640 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 641 | 866 | 6.3E-55 | IPR027417 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 910 | 1190 | 3.0E-53 | IPR036640 |
| Gene3D | G3DSA:3.40.50.300 | - | 629 | 878 | 2.0E-74 | IPR027417 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 301 | 626 | 5.0E-46 | IPR036640 |
| SMART | SM00382 | AAA_5 | 671 | 844 | 9.5E-13 | IPR003593 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 330 | 610 | 29.753109 | IPR011527 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 644 | 867 | 22.995972 | IPR003439 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 950 | 1190 | 36.198853 | IPR011527 |
| ProSitePatterns | PS00211 | ABC transporters family signature. | 769 | 783 | - | IPR017871 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 897 | 921 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 901 | 921 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 213 | 236 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13080.1 | multidrug resistance-associated protein 3. encodes an ATP-dependent MRP-like ABC transporter able to transport glutathione-conjugates as well as chlorophyll catabolites. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. | 0 |
| RefSeq | XP_004968378.2 | ABC transporter C family member 3 [Setaria italica] | 0 |
| Q9LK64 | ABC transporter C family member 3 OS=Arabidopsis thaliana OX=3702 GN=ABCC3 PE=1 SV=1 | 0 | |
| TrEMBL | K3XDS0 | ABC transporter C family member 3 OS=Setaria italica OX=4555 GN=101777732 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology