HalophFGD

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Basic Information
Locus ID: gene-QOZ80_1AG0011080
Species & Taxonomic ID: Eleusine coracana subsp. coracana & 191504
Genome Assembly: GCA_032690845.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
chr1A 8255861 8262409 + gene-QOZ80_1AG0011080
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.90 42,209.85 Da 52.70 111.16 0.06
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF81383 F-box domain 15 66 2.35E-8 IPR036047
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_034579747.1 uncharacterized protein LOC117843288 [Setaria viridis] 0
TrEMBL A0A5J9VVB2 F-box domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_13291 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 13 AH03.2687, AH03.692, AH03.694, BH03.2828, BH03.454, BH03.819 ...
BH03.824, BH03.833, CH03.3031, CH03.913, CH03.918, CH03.922, CH03.936
Poaceae Eleusine coracana subsp. coracana 4 gene-QOZ80_1AG0011080, gene-QOZ80_7AG0561550 ...
gene-QOZ80_7BG0594810, gene-QOZ80_7BG0595060
Poaceae Lolium multiflorum 2 gene-QYE76_018786, gene-QYE76_025567
Poaceae Oryza coarctata 4 Oco14G004560, Oco14G004620, Oco14G005020, Oco14G005130
Poaceae Oryza sativa 1 LOC_Os07g13930.1
Poaceae Paspalum vaginatum 2 gene-BS78_02G109200, gene-BS78_02G109400
Poaceae Sporobolus alterniflorus 2 Chr19G015760, Chr28G003740
Poaceae Zoysia japonica 2 nbis-gene-49405, nbis-gene-49406
Poaceae Zoysia macrostachya 4 Zma_g4955, Zma_g4956, Zma_g4957, Zma_g4958
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.