Basic Information
Locus ID:
gene-QOZ80_1AG0009830
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1A | 7271958 | 7273274 | - | gene-QOZ80_1AG0009830 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.92 | 46,764.60 Da | 33.29 | 108.68 | 0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 70 | 8.5E-10 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 148 | 208 | 8.7E-8 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 100 | 120 | 1.8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 269 | 329 | 7.2E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 49 | 328 | 4.76E-63 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 342 | 438 | 3.23E-18 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 169 | 264 | 1.4E-28 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 168 | 1.7E-36 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 265 | 334 | 7.5E-16 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 335 | 438 | 4.9E-23 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 316 | 339 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 98 | 122 | 9.9 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 243 | 267 | 67.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 292 | 315 | 180.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 195 | 219 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 171 | 194 | 13.0 | IPR003591 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G47580.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_039851243.1 | receptor kinase-like protein Xa21 [Panicum virgatum] | 0 |
| Q1MX30 | Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. indica OX=39946 GN=XA21 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9UFB9 | LRRNT_2 domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_31495 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_1AG0009830, gene-QOZ80_1AG0026220 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g7616 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000033l.39 |