Basic Information
Locus ID:
gene-QOZ80_1AG0007870
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
BTB/POZ domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1A | 5517007 | 5517879 | - | gene-QOZ80_1AG0007870 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.18 | 33,158.71 Da | 49.37 | 82.07 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18280 | BTB_POZ_BPM_plant | 162 | 276 | 1.0016E-45 | - |
| CDD | cd00121 | MATH | 18 | 147 | 4.66125E-5 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 168 | 271 | 2.5E-22 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 155 | 274 | 1.41E-27 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 36 | 154 | 3.76E-11 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 18 | 148 | 1.9E-9 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 149 | 290 | 8.3E-37 | IPR011333 |
| SMART | SM00225 | BTB_4 | 176 | 280 | 3.7E-18 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 176 | 243 | 17.189787 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 95 | 117 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.5 | - | 0 |
| RefSeq | XP_047084141.1 | BTB/POZ and MATH domain-containing protein 1-like [Lolium rigidum] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9WPS2 | BTB domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_01519 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_1AG0007870, gene-QOZ80_1BG0056650 ... |