Basic Information
Locus ID:
gene-QOZ80_1AG0000810
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1A | 668154 | 670889 | - | gene-QOZ80_1AG0000810 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.10 | 36,318.74 Da | 57.97 | 65.82 | -0.65 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 108 | 326 | 4.5E-75 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 219 | 316 | 2.03E-18 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 215 | 329 | 4.2E-39 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 220 | 317 | 25.792259 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 29 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 148 | 185 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G29080.1 | phytochrome-associated protein 2. phytochrome-associated protein 2 (PAP2) | 0 |
| RefSeq | XP_044975517.1 | auxin-responsive protein IAA3-like isoform X2 [Hordeum vulgare subsp. vulgare] | 0 |
| Q5NB25 | Auxin-responsive protein IAA3 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0A9CXY9 | Auxin-responsive protein OS=Arundo donax OX=35708 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology