Basic Information
Locus ID:
gene-QOZ80_1AG0000250
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1A | 269210 | 272501 | - | gene-QOZ80_1AG0000250 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.06 | 114,877.26 Da | 38.63 | 100.29 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 137 | 182 | 2.0E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 439 | 499 | 1.6E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 270 | 330 | 4.1E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 37 | 82 | 3.8E-9 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 742 | 952 | 8.5E-43 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 563 | 621 | 9.2E-7 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 237 | 615 | 9.02E-64 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 733 | 1045 | 4.72E-71 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 58 | 288 | 2.49E-44 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 341 | 654 | 7.2E-81 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 235 | 338 | 2.5E-27 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 36 | 234 | 2.8E-39 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 722 | 820 | 2.7E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 821 | 1032 | 3.7E-56 | - |
| SMART | SM00369 | LRR_typ_2 | 462 | 485 | 400.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 268 | 292 | 44.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 585 | 608 | 22.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 740 | 1035 | 2.4E-33 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 218 | 244 | 71.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 169 | 193 | 33.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 317 | 341 | 0.98 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 740 | 1026 | 36.68269 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 746 | 769 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 866 | 878 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1025 | 1066 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1051 | 1066 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 0 |
| RefSeq | XP_034595391.1 | receptor-like protein kinase HSL1 [Setaria viridis] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A4U6UBT9 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_5G002800v2 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology